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findcontours in java not giving desired results

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Hello All, Today is my first day at OpenCV. I recently got fascinated with OCR and found OCV to be best and can do more than usual it. So after setting up my development environment I started to code. OCV version 2.4.5 JDK 1.7 Eclipse I got the code the test code working. Somehow my contours are not getting matched. Not sure if I am missing something import org.opencv.imgproc.*; import org.opencv.core.*; import org.opencv.highgui.*; import java.util.*; public class Test{ public static void main(String args[]){ // Load the library System.loadLibrary("opencv_java245"); // Consider the image for processing Mat image = Highgui.imread("C:/Users/patiprad/Desktop/IwQY6.png", Imgproc.COLOR_BGR2GRAY); Mat imageHSV = new Mat(image.size(), Core.DEPTH_MASK_8U); Mat imageBlurr = new Mat(image.size(), Core.DEPTH_MASK_8U); Mat imageA = new Mat(image.size(), Core.DEPTH_MASK_ALL); Imgproc.cvtColor(image, imageHSV, Imgproc.COLOR_BGR2GRAY); Imgproc.GaussianBlur(imageHSV, imageBlurr, new Size(5,5), 0); Imgproc.adaptiveThreshold(imageBlurr, imageA, 255,Imgproc.ADAPTIVE_THRESH_MEAN_C, Imgproc.THRESH_BINARY,7, 5); Highgui.imwrite("C:/Users/patiprad/Desktop/test1.png",imageBlurr); List contours = new ArrayList(); Imgproc.findContours(imageA, contours, new Mat(), Imgproc.RETR_LIST,Imgproc.CHAIN_APPROX_SIMPLE); //Imgproc.drawContours(imageBlurr, contours, 1, new Scalar(0,0,255)); for(int i=0; i< contours.size();i++){ System.out.println(Imgproc.contourArea(contours.get(i))); if (Imgproc.contourArea(contours.get(i)) > 50 ){ Rect rect = Imgproc.boundingRect(contours.get(i)); System.out.println(rect.height); if (rect.height > 28){ //System.out.println(rect.x +","+rect.y+","+rect.height+","+rect.width); Core.rectangle(image, new Point(rect.x,rect.height), new Point(rect.y,rect.width),new Scalar(0,0,255)); } } } Highgui.imwrite("C:/Users/patiprad/Desktop/test2.png",image); } } Certainly am missing some basics here. Please find the result of the code. [Result.png](/upfiles/1366570711277386.png) [Input.png](/upfiles/13665706855601303.png)

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